Transformer: The Deep Chemistry of Life and Death

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Lane explains cellular processes for producing energy particularly cellular respiration in animals. He recounts the history of key discoveries that underlie our understanding of cellular respiration and profiles the scientists involved. He compares cellular respiration with photosynthesis in plants and variants of these processes in microbes, pointing out the similarities and differences. He shows how early forms of the same processes could have initiated life detailing a specific scenario in hydrothermal vents. Lane explores how cellular respiration impacts health and aging. He makes the case that increasing dysfunction in cellular respiration is a primary factor in the increased rate of cancer and Alzheimer’s as we age and in aging itself. Above is the information needed to cite this article in your paper or presentation. The International Committee Transformer is a monstrous tome. And it's even more of a chimera in audiobook form. Having read the author's previous book, The Vital Question, I knew a bit of what to expect, a high-level explanation of an important biochemical process, with all the history, false starts, important scientists and, most crucially, the chemistry behind it. The third peculiarity is the genetic code itself. There are clues that hint at direct interactions between the letters in DNA and the amino acids of proteins. This means the code is not random. A random piece of RNA will template a small protein, giving it a sequence that is specified by those non-random interactions. If that speeds up metabolism—the Krebs cycle for example—then the random sequence will be selected. And that means there’s no problem with the origin of information in biology. 3. The first animals evolved through a high-wire metabolic balancing act. ageing, related diseases and cancer newly explained as consequences of slowing and reversing the Krebs cycle

Lane is among the vanguard of researchers asking why the Krebs cycle, the “perfect circle” at the heart of metabolism, remains so elusive more than eighty years after its discovery. Transformer is Lane’s voyage, as a biochemist, to find the inner meaning of the Krebs cycle―and its reverse―why it is still spinning at the heart of life and death today. The Krebs cycle is a series of chemical reactions that take place (in part or entirely) in most living organisms. Running in one direction it explains respiration, the process by which organic molecules undergo controlled combustion to produce energy, while in reverse it is one of the ways that complex organic molecules can be constructed. At the same time we see the importance of flows of energy and electrical potentials in understanding life. It's heady stuff. Lane goes on to show how the same processes that support life can produce cancers - and why these processes change over time, resulting in ageing and death. When you were a medical student, you were told to sit down, shut up, raise your hand when you wanted to go to the bathroom, and memorize a whole bunch of strange names of carboxylic acids that make up the Krebs cycle. I thought this was a gigantic waste of time and had nothing to do with the practice of medicine. A thrilling tour of the remarkable stories behind the discoveries of some of life’s key metabolic pathways and mechanisms. He lays bare the human side of science… The book brings to life the chemistry that brings us to life. Joseph Moran, ScienceEvery life sciences major remembers learning about the Krebs cycle in college; if your undergraduate experience was anything like mine, then you also remember forgetting it immediately. When we learn about this cycle at the heart of metabolism, it’s presented almost exclusively in the context of energy production. Producing ATP is important, but so is generating the macromolecules that come to constitute tissues and organs. Metabolism does both, utilizing the Krebs cycle as a sort of roundabout to accomplish the needs of the cell. If all this language sounds like Klingon, that is because this book is really far from an easy read, which can be said for all Lane's books I have seen. He is an excellent writer (albeit prone to digressions), but the topic is so disconnected from other popularized science that it requires a lot of new learning and understanding. It does not help that all claimed rules have many exceptions, leaving me with a fuzzy feeling that I got a glimpse of something great, but cannot dare to make my own conclusions (such as, should I give up my metformin while I follow a ketogenic diet and active lifestyle because it seems to follow from the book outlook applied to metformin-related published papers that metformin acts like a handbrake i.e. that it hinders my progress and increases cancer occurrence risk, while it could help sedentary carb-overloaded persons). pagination, the shorter form provides sufficient information to locate the reference. The NLM now lists all authors. Plants make use of rubisco for photosynthesis. Rubisco is inefficient and is as likely to fix CO2 as O2. CO2 levels were high when the molecule evolved, but even today the buildup of CO2 within the leaf causes crops to lose as much as one quarter of their yield. Amazingly, rubisco now turns out to be widespread in ancient bacteria, doing a totally different job: degrading sugars derived from the RNA of other cells, to support growth fueled by eating other cells. In anoxygenic photosynthesis, chlorophyll is used to strip electrons from H2S which are then passed onto ferredoxin directly. The waste product is not oxygen but sulfur. The huge advantage here is that the sun now powers the transfer of electrons, without the need for burning fuel to power pumping. The disadvantage is that these bacteria still derive all their electrons from geological sources such as volcanoes and hydrothermal vents.

Perfect for a trivia night or a long trip, #TrainTeasers will both test your knowledge of this country`s rail system and enlighten you on the most colourful aspects of its long history. Meet trunk murderers, trainspotters, haters of railways, railway writers, Ministers for Transport good and bad, railway cats, dogs and a railway penguin. This is NOT a book for number-crunching nerds. Many of the answers are guessable by the intelligent reader. It is a quiz, yes, but also a cavalcade of historical incident and colour relating to a system that was the making of modern Britain. The great immunologist Peter Medawar said we age because we outlive our allotted time as determined by the statistical laws of selection. This textbook view sees ageing and the diseases of old age as little more than the unmasking of late-acting genes, whose effects do us in.The response to drugs can vary dramatically, depending on a few tiny differences in mitochondrial DNA, with big differences in outcome between males and females. After reading this book, one will understand how this cycle of matter (eponymously named in the 1930s after Sir Hans Adolf Krebs) is a sound explanation for the origin of life, lifespan, and the end of life. You will learn how the whole beautiful process can be understood in terms of physical chemistry, which is a unique sweet spot in the massive space of possible scientific explanations. It is a remarkable story.

For more information on the ICMJE Recommendations for the Conduct, Reporting, Editing, and Publication of Scholarly Work Another impressive aspect of this book is the way it brings the real scientific method into the spotlight. This is something that science writing tend to over-simplify and treat with almost religious awe. Yet it is undertaken by flawed human beings. In showing how explanations of the Krebs cycle, the workings of mitochondria and more were gradually developed, Lane gives us plenty of stories of human endeavour and how the development of good science is not a straight line to success, but involves detours, misunderstandings and, yes, sometimes human pettiness. In a footnote, the author confides that “probably only a tenth of what I wanted to write about actually made it into the book.” On behalf of humanities majors everywhere, I can only say thank goodness. I thought the best part of the book was how the author detailed the scientists’ quest to discover those elusive secrets. I also quite enjoyed the appendix and source material that he used. Rather than just a list of articles and books, the author took the time to review most of the research material in detail, giving the reader many starting points should they wish to further investigate the subject on their own. Energy from the sun is captured by plants (photosynthesis) and bottled up in molecules (otherwise known as food that is made of carbon, hydrogen, and oxygen, chemically speaking) which we humans then eat. The human Krebs cycle (electron transport chain) then strips out the energy (electrons) from this food and passes it on for cellular respiration. Think of it as taking a food molecule, ripping out the carbon and oxygen to make CO 2 waste, and then ripping out the hydrogen to make H 2O. This is basically taking hydrogen and burning it in oxygen to give us energy to crawl, walk, or run. Dr Lane describes it as “feeding hydrogen to the ravaging beast called oxygen.” One can think of the entirety of medicine as tending to faulty human cellular respiration. Dr Lane coherently shows how this small sliver of reality is embedded in a much more general evolutionary history, starting with alkaline vents at the bottom of the ocean and ending up at human consciousness. In between, the author plainly tells the tale of the development of DNA, the fluke of photosynthesis, oxygen in the atmosphere, the one-in-a-gabillion appearance of the eukaryotic cell, multicellular organisms, and animal predation, all grounded in survival of the fittest and death/extinction of the weakest.

By Leonard Downie Jr.

We are so aware of the vast amounts of information stored in our genes, that we sometimes overlook the obvious. There’s no difference in the information content between a living organism and one that died a moment ago. What stopped was metabolism. When I saw this book being offered up on NetGalley, I was particularly interested in the subject, having majored in Biology/Human Anatomy and Physiology in college. Besides, the Kreb’s Cycle (and my favorite organelle, the mighty mitochondria) is one of the most important processes in the human body, one that provides the energy that allows it to hum along. I reluctantly rate this book 3.5/5. It’s really well-written and enjoyable in spots, but I found myself slogging through the rest. I wouldn’t say that this is a book in search of an audience, but the audience has to be carefully found. Halpern SD, Ubel PA, Caplan AL, Marion DW, Palmer AM, Schiding JK, et al. Solid-organ transplantation in HIV-infected

In this compulsively readable book, Lane takes us on a riveting journey, ranging from the flow of energy to new ways of understanding cancer. What does Lane say is the best thing we can do to have long healthy lives? You’d never guess. Eat a modest quantity of healthy food and stay active. 🙂 But be aware, there’s a large element of chance in health. Until now, biology has tended to study the materials that make up the instruments. The time has come to close our eyes and listen to the music.” Mitochondrial genes tend to evolve much ten to fifty times faster than nuclear genes, as they are copied far more than nuclear genes, and so they accumulate more mutations. A clean-up process in early life sieves out the most detrimental mutations. That’s why mitochondrial diseases directly affect only about 1 in 5,000 of us.

Alternately admiring and critical, unvarnished, and a closely detailed account of a troubled innovator. While mutations may cause cancer, particularly in young people, most mutations found in people with cancer arise once the process is underway. The major problem is the decline in respiration efficiency with age; damage may be “caused by protein unfolding or cross-linking, oxidation by ROS or glycation (the tendency of sugars such as glucose to react with proteins and lipids).” ROS stands for reactive oxygen species, free radicals. The ROS signals the cell to slow down respiration to control the ROS. The Krebs cycle intermediate succinate accumulates causing epigenetic changes (so gene activity follows faulty metabolism rather than causing it) and the Krebs cycle sometimes flows in reverse, creating biosynthesis (this was the original direction of the Krebs cycle). The cellular environment now “shouts grow”. Transformer is a complex yet accessible, illuminating, and thrilling exploration of the vitality and elemental mysteries of our existence.